U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX278164: Whole Genome Sequencing of pig roundworm
1 ILLUMINA (Illumina HiSeq 2000) run: 8.2M spots, 1.6G bases, 1Gb downloads

Design: Illumina sequencing of De novo nematode genome sequencing project to sequence, Ascaris suum, or Pig Roundworm 2880264769 paired end RNA-Seq library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: De novo nematode genome sequencing project to sequence, Ascaris suum, or Pig Roundworm.
show Abstracthide Abstract
Ascaris species are the largest intestinal worms and responsible for ascariasis, the commonest helminth infection of humans worldwide. Adult Ascaris live in the small intestine, where each female can produce hundreds of thousands of eggs each day. Eggs are passed into the environment where, over about 10 days, they develop into larvae. This takes place in the soil, thus Ascaris (along with hookworms and whipworms) are classified as soil-transmitted helminths. Human infections are common in sub-tropical and tropical areas with poor sanitation and are predominantly due to the species A. lumbricoides. A closely related species A. suum typically infects pigs.
Sample:
SAMN02144346 • SRS421035 • All experiments • All runs
Organism: Ascaris suum
Library:
Name: 2883099276
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: PAIRED
Spot descriptor:
forward101  reverse

Runs: 1 run, 8.2M spots, 1.6G bases, 1Gb
Run# of Spots# of BasesSizePublished
SRR8516328,218,8261.6G1Gb2013-05-15

ID:
395187

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...